miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|87142062|gb|DY386673.1|DY386673 ACCCCCTTATAAGATGGCAAGGTTATGGTTTCAGAAATGAAAACCCCTTAAACAAATCTGAACATGAAGAACACAAACAC
CAGCCGAACAGTTTATTACGGGGGGCATTCCCATAGTTGCGTCCCACTAAGTTTTTAAACTAGAACCAGAAACACGTTGT
TTAACAACCGACGATACCCCGAAGGAACGGAGCACAAACACAAACCATAACACCAACATTAACAGACTCGACCCACAGAC
GGACTACTAAATAGGCATTGATCATATGAAGCTAGATAAAAGACCCCCAAAATAGTGGAAAGGATGGCGGAAGTTCAGTG
GCCACCACGAAGGCGGAGCACCAGGTGAAGGGGGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTGCGGCCGTCCTCGA
GCTGCTTCCCGGCAAAAATCAACCTTTGCTGGTCCGGAGGGATCCCTTCCTTGGCCTGGATCTTGGCTTTTACATTGGCG
ATGGGGTCAGAAGATTCCACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTTTTAACGAAAATCTGCATCTCTAGAGAAAA
AAAAAGAGCCTTGAGAGCCTCTTGATGCCTCGGGCCGAATTCGGCACGAGGTTTTTTTTTAACTAGAAACATAGATCCCT
AAACCGAAGAAAAGAGAGAACAGATCAGCAGTTACACACAGCTTTGAACCAAAATTAAAAATTCTCACAATGCGAACGAT
TCGATCCCGTTTTGAT




Most similar to sp|P0CH10|RL403_CHLRE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P0CH10|RL403_CHLRE Ubiquitin-60S ribosomal protein L40
           OS=Chlamydomonas reinhardtii GN=UBI3 PE=1 SV=1
          Length = 128

 Score =  121 bits (303), Expect = 6e-27
 Identities = 62/65 (95%), Positives = 62/65 (95%)
 Frame = -3

Query: 548 MQIFVKTLTGKTITLEVESSDPIANVKAKIQAKEGIPPDQQRLIFAGKQLEDGRTLADYN 369
           MQIFVKTLTGKTITLEVESSD I NVKAKIQ KEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 368 IQKES 354
           IQKES
Sbjct: 61  IQKES 65